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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015817928.1_cds_XP_016499376.1_13306
CDS Infomation

[gene=LOC107817989] [db_xref=GeneID:107817989] [protein=homogentisate solanesyltransferase, chloroplastic-like] [protein_id=XP_016499376.1] [location=complement(join(85552..85626,85956..85988,86893..86955,87124..87241,87751..87843,88710..88783,94124..94349,94517..94663,94746..94867,95541..95774))] [gbkey=CDS]
Sequence

ATGGAGCTGGCTTGTTCATCTTCCTCTTCCCTTCGATTTTCATCTGTTTTAACTCACCAA
GATACTGCTGCTTCCCGCTACAGAAAGTTACCACCCACTTCACCTTCTTGTAAAGCTGCT
AACTTTGTGCTAAAATCTTCCAAGAACTTGTCATCTTCAGCTGGATTCCACATTGGCTAC
ACAAACTTTTCAAAGACTGTTTCATATAGAAAATACAGGCACATTTCCATCCGGGCATGC
TCTCAAGTTGGTACTGCTGGATCCGAACCAGTATTGGATAAGCTTTCACAATTTAAAGAT
GCCTTTTGGAGATTTTTGAGGCCCCATACTATACGTGGAACAGCATTAGGATCCCTCTCA
TTGGTTACAAGAGCTTTGATTGAGAATCCAAATCTAATCAGGTGGTCATTAGCAATGAAG
GCTTTTTCTGGTCTTATTGCTTTAATATGTGGGAATGGTTATATAGTAGGCATCAATCAA
ATATATGACATTGGCATTGACAAGGTAAACAAGCCATACTTACCCATAGCTGCGGGAGAT
CTTTCAGTTCAGTCTGCATGGCTCTTGGTGCTATTGTTCGCTGTGGCTGGCCTTCTTATT
GTTGGGATTAATTTTGGCCCCTTCATTACTTCTCTTTACTGTCTTGGTCTCTTTCTAGGT
ACCATTTATTCGGTCCCCCCATTTCGCATGAAGAGATTTGCTGTCGTAGCATTCTTAATA
ATTGCCACGGTACGGGGTTTTCTTCTTAATTATGGTGTGTATTATGCCACAACAGCTGCT
CTGGGGCTAAGCTTTCAGTGGAGCTCACCTGTTGCATTTATTACCACTTTTGTGACTTTG
TTTGCACTGGTCATTGCCATCACCAAGGATCTACCAGATGTGGAGGGTGACCGCAAGTTT
CAGATATCTACCTTGGCAACGAAGCTTGGTGTGAGAAACATAGCATTCCTTGGCTCTGGG
CTTTTGTTGGCAAACTACATTGGTGCTGTAGTTGCTGCAATTTACATGCCCCAAGCATTC
AGGAGCAGCTTAATGATACCTGTACATGCCATCTTGGCATTGTGTTTAGTCTTCCAGGCA
TGGTTGTTGGAAAAAGCGAATTACACTAAGGAAGCAATCTCAGCATACTATCAATTCATA
TGGAATCTCTTCTATGCTGAGTACCTTATCTTCCCTTTCATCTAA

Peptide Sequence

PEP ID

XP_016499376.1
PEP Infomation

PREDICTED: homogentisate solanesyltransferase, chloroplastic-like [Nicotiana tabacum]
Sequence

MELACSSSSSLRFSSVLTHQDTAASRYRKLPPTSPSCKAANFVLKSSKNLSSSAGFHIGY
TNFSKTVSYRKYRHISIRACSQVGTAGSEPVLDKLSQFKDAFWRFLRPHTIRGTALGSLS
LVTRALIENPNLIRWSLAMKAFSGLIALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGD
LSVQSAWLLVLLFAVAGLLIVGINFGPFITSLYCLGLFLGTIYSVPPFRMKRFAVVAFLI
IATVRGFLLNYGVYYATTAALGLSFQWSSPVAFITTFVTLFALVIAITKDLPDVEGDRKF
QISTLATKLGVRNIAFLGSGLLLANYIGAVVAAIYMPQAFRSSLMIPVHAILALCLVFQA
WLLEKANYTKEAISAYYQFIWNLFYAEYLIFPFI

Transcript Sequence

Gene sequence data has not been registered.